pulsemcp scanned Safe content atomic mcp-remote

LAMMPS

MCP LAMMPS Server provides AI assistants with direct control over LAMMPS molecular dynamics simulations through a comprehensive set of tools for creating, configuring, running, and analyzing simulations. Built by the MCP LAMMPS Development Team, it wraps the LAMMPS Python interface to enable natural language interaction with complex MD workflows including structure setup, equilibration and production runs, real-time monitoring, trajectory analysis, and thermodynamic property calculations. The server supports multiple force fields (TIP3P, CHARMM, AMBER), various ensembles (NVT, NPT), and includes built-in analysis tools for RMSD, radius of gyration, and energy calculations, making it valuable for computational chemistry research, materials science studies, and educational molecular dynamics workflows where users need to run simulations without writing complex LAMMPS input scripts.

Cognium trust score

Tier

Scanned

Composite of vulnerability cleanliness, spec conformance, provenance, stability, and usage signals — scanned and weighted by Cognium. Human and agent signals are tracked separately. Last scanned 2026-09-19.

Scan details: Circle-IR · 2026-09-19 · Appeal

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Metadata

Version: 1.0.0
Skill type: atomic
Execution layer: mcp-remote
Category: monitoring
Source: PulseMCP
Repository: github.com/chenghao-wu/mcp_lammps
Author type: human
Last scanned: 2026-09-19
Updated: 2026-09-19

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MCP

Resolve LAMMPS from your agent

Streamable HTTP transport at https://api.skillsregistry.net/mcp. No auth for read tools. Discovery: .well-known/mcp.json.

One command in your shell — Claude Code wires it up and verifies the connection. Run /mcp in any session to confirm.

claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp

Swap --scope user for --scope project to commit it to .mcp.json.

Your client Same endpoint everywhere; only the config key differs. The full list is in the descriptor.

Claude Desktop · Settings → Connectors → Add custom connector

https://api.skillsregistry.net/mcp

Paste the URL as the connector endpoint. No authentication.

ChatGPT · Settings → Connectors → Create (developer mode) → MCP server URL

https://api.skillsregistry.net/mcp

Authentication: none. Works in chat and deep research — the server exposes the connector search and fetch tools.

Codex CLI · ~/.codex/config.toml

[mcp_servers.skillsregistry]
url = "https://api.skillsregistry.net/mcp"