GTEx Portal
This TypeScript-based MCP server provides access to GTEx (Genotype-Tissue Expression) genomics data through 25 specialized tools organized into expression analysis, association analysis, and reference/dataset categories. Built with comprehensive TypeScript type definitions and a robust API client that handles GTEx Portal API v2 communication, it offers tools for gene expression profiling across tissues, eQTL/sQTL genetic association analysis, variant lookups, and dataset metadata retrieval with features like error handling, pagination, and parameter validation. The implementation targets genomics researchers, bioinformaticians, and AI assistants working with human gene expression data who need programmatic access to one of the largest publicly available genomics datasets for tissue-specific expression analysis, genetic variant associations, and comparative genomics studies.
Composite of vulnerability cleanliness, spec conformance, provenance, stability, and usage signals — scanned and weighted by Cognium. Human and agent signals are tracked separately.
View full trust & usage report →Metadata
- Version
- 1.0.0
- Skill type
- atomic
- Execution layer
- mcp-remote
- Category
- search
- Source
- PulseMCP
- Repository
- github.com/augmented-nature/gtex-mcp-server
- Author type
- human
- Updated
- 2026-04-28
Use via MCP
Resolve GTEx Portal from your agent
Streamable HTTP transport at https://api.skillsregistry.net/mcp. No auth for read tools. Discovery: .well-known/mcp.json.
One command in your shell — Claude Code wires it up and verifies the connection. Run /mcp in any session to confirm.
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp--scope user for --scope project to commit it to .mcp.json.