Nextflow Developer Tools
Nextflow Developer Tools MCP provides a suite of tools for Nextflow development and testing, built with FastMCP. It enables AI assistants to interact with a local Nextflow repository to perform tasks like building from source, running tests (integration, specific, and plugin tests), executing the development version, and managing the development directory. The implementation includes comprehensive logging, error handling, and environment variable configuration, making it particularly valuable for developers working on Nextflow pipelines who want to streamline their workflow without leaving their AI assistant interface.
Composite of vulnerability cleanliness, spec conformance, provenance, stability, and usage signals — scanned and weighted by Cognium. Human and agent signals are tracked separately. Last scanned 2026-09-28.
Scan details: Circle-IR · 2026-09-28 · Appeal
View full trust & usage report →Metadata
- Version
- 1.0.0
- Skill type
- atomic
- Execution layer
- mcp-remote
- Category
- devops-ci
- Source
- PulseMCP
- Repository
- github.com/adamrtalbot/mcp-nextflow
- Author type
- human
- Last scanned
- 2026-09-28
- Updated
- 2026-09-28
Use via MCP
Resolve Nextflow Developer Tools from your agent
Streamable HTTP transport at https://api.skillsregistry.net/mcp. No auth for read tools. Discovery: .well-known/mcp.json.
One command in your shell — Claude Code wires it up and verifies the connection. Run /mcp in any session to confirm.
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp--scope user for --scope project to commit it to .mcp.json.