# pymol-cursor-mcp

> Use this tool when you need to control PyMOL using natural language commands, describing molecular structures and styles in plain language to execute specific actions. It solves the problem of manually entering complex PyMOL commands, allowing for more intuitive interaction through XML-RPC. The tool takes natural language inputs and outputs corresponding PyMOL commands, ideal for streamlining molecular visualization workflows.

Canonical page: https://skillsregistry.net/skills/truong128-pymol-cursor-mcp  
JSON: https://api.skillsregistry.net/v1/skills/truong128-pymol-cursor-mcp

## Description

Control PyMOL from Cursor via natural language. Enables describing molecular structures and styles in plain language to execute PyMOL commands through XML-RPC.

## Trust

- **Trust score (0–1):** 0.69
- **Verification tier:** scanned
- **Last scanned:** 2026-09-02

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** other
- **Updated:** 2026-09-02

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/rezgjx76ai)
- **Repository:** <https://github.com/truong128/pymol-cursor-mcp>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "truong128-pymol-cursor-mcp"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/truong128-pymol-cursor-mcp` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/truong128-pymol-cursor-mcp/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt