# BioTrax

> Use this tool when you need to retrieve and manage genomic data from various sources, such as ENCODE, ChIP-Atlas, and GEO, to solve problems like data integration and provenance tracking. BioTrax provides a unified interface for fetching tracks, peaks, and sequences, and offers outputs like unified metadata and direct FASTQ downloads. It is ideal for use cases requiring streamlined access to genomic data from multiple repositories, with resolved DOI/PMID provenance.

Canonical page: https://skillsregistry.net/skills/spacesorcerer-biotrax  
JSON: https://api.skillsregistry.net/v1/skills/spacesorcerer-biotrax

## Description

Unified genomic track, peak, and sequence retrieval tool for ENCODE, ChIP-Atlas, ReMap, GEO, and SRA/ENA with unified metadata, resolved DOI/PMID provenance, and direct FASTQ download without SRA toolkit.

## Trust

- **Trust score (0–1):** 0.47
- **Verification tier:** scanned
- **Last scanned:** 2026-08-31

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** other
- **Updated:** 2026-08-31

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/r3fd2qe1ay)
- **Repository:** <https://github.com/SpaceSorcerer/BioTrax>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "spacesorcerer-biotrax"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/spacesorcerer-biotrax` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/spacesorcerer-biotrax/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt