# mcp-uniprot

> mcp-uniprot — pipeworx-io-mcp-uniprot. Use this tool when you need to access a comprehensive knowledge-base of protein sequences and their functions, integrating data from UniProt and the European Bioinformatics Institute (EBI). It solves problems related to protein sequence analysis, functional annotation, and data mining, providing inputs such as protein identifiers and outputs like detailed sequence information and functional descriptions. Ideal for bioinformatics and proteomics research, it offers a git interface for version control and collaboration.

Canonical page: https://skillsregistry.net/skills/pipeworx-io-mcp-uniprot  
JSON: https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-uniprot

## Description

UniProt protein sequence + function knowledge-base (EBI)

## Trust

- **Trust score (0–1):** 0.99
- **Verification tier:** verified
- **Last scanned:** 2026-09-28

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** container
- **Runtime environment:** vm
- **Category:** other
- **Updated:** 2026-09-28

## Source

- **Source listing:** [GitHub](https://github.com/pipeworx-io/mcp-uniprot)

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "pipeworx-io-mcp-uniprot"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-uniprot` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-uniprot/pull`

---
SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt