# mcp-string-db

> mcp-string-db — pipeworx-io-mcp-string-db. Use this tool when you need to access and analyze protein-protein interaction networks across a vast range of organisms. The mcp-string-db provides comprehensive interaction data for approximately 12,000 organisms, solving problems in fields like bioinformatics and systems biology. It accepts queries and returns interaction networks, enabling researchers to explore complex biological relationships.

Canonical page: https://skillsregistry.net/skills/pipeworx-io-mcp-string-db  
JSON: https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-string-db

## Description

STRING protein-protein interaction networks across ~12k organisms

## Trust

- **Trust score (0–1):** 0.65
- **Verification tier:** scanned
- **Last scanned:** 2026-09-01

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** container
- **Runtime environment:** vm
- **Category:** other
- **Updated:** 2026-09-26

## Source

- **Source listing:** [GitHub](https://github.com/pipeworx-io/mcp-string-db)

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "pipeworx-io-mcp-string-db"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-string-db` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-string-db/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt