# mcp-reactome

> mcp-reactome — pipeworx-io-mcp-reactome. Use this tool when you need to access and analyze biological pathway data to understand complex interactions between molecules, or to identify potential therapeutic targets. The mcp-reactome tool provides a comprehensive database of biological pathways, solving problems related to systems biology and molecular interaction research. It accepts gene or protein inputs and returns relevant pathway information, ideal for use in bioinformatics and systems biology research contexts.

Canonical page: https://skillsregistry.net/skills/pipeworx-io-mcp-reactome  
JSON: https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-reactome

## Description

Reactome biological pathway database

## Trust

- **Trust score (0–1):** 0.50
- **Verification tier:** unverified

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** container
- **Runtime environment:** vm
- **Category:** database
- **Updated:** 2026-09-26

## Source

- **Source listing:** [GitHub](https://github.com/pipeworx-io/mcp-reactome)

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "pipeworx-io-mcp-reactome"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-reactome` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-reactome/pull`

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