# mcp-complex-portal

> mcp-complex-portal — pipeworx-io-mcp-complex-portal. Use this tool when you need to access and manage complex biomolecular data, such as protein interactions and complexes, to solve problems in bioinformatics and systems biology research. The mcp-complex-portal tool provides an interface to the EBI Complex Portal, allowing users to input queries and retrieve output data on complex biomolecular interactions. It is particularly useful when working with large datasets and requiring version control through git.

Canonical page: https://skillsregistry.net/skills/pipeworx-io-mcp-complex-portal  
JSON: https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-complex-portal

## Description

EBI Complex Portal MCP.

## Trust

- **Trust score (0–1):** 0.97
- **Verification tier:** verified
- **Last scanned:** 2026-09-28

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** container
- **Runtime environment:** vm
- **License:** MIT
- **Updated:** 2026-09-28

## Source

- **Source listing:** [GitHub](https://github.com/pipeworx-io/mcp-complex-portal)

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "pipeworx-io-mcp-complex-portal"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-complex-portal` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-complex-portal/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt