# mcp-cbioportal

> mcp-cbioportal — pipeworx-io-mcp-cbioportal. Use this tool when you need to analyze and visualize cancer genomics data, providing insights into tumor biology and patient outcomes. It solves problems related to cancer research, such as identifying genetic alterations and understanding their clinical significance. The cBioPortal MCP takes in genomic data as input and outputs interactive visualizations and tables for further investigation.

Canonical page: https://skillsregistry.net/skills/pipeworx-io-mcp-cbioportal  
JSON: https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-cbioportal

## Description

cBioPortal MCP — cancer genomics portal.

## Trust

- **Trust score (0–1):** 0.97
- **Verification tier:** verified
- **Last scanned:** 2026-09-28

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** container
- **Runtime environment:** vm
- **License:** MIT
- **Updated:** 2026-09-28

## Source

- **Source listing:** [GitHub](https://github.com/pipeworx-io/mcp-cbioportal)

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "pipeworx-io-mcp-cbioportal"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-cbioportal` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/pipeworx-io-mcp-cbioportal/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt