# cBioPortal MCP Server

> Use this tool when you need to access and analyze cancer genomics data, enabling exploration of cancer studies and retrieval of mutations and clinical information. It solves problems related to cancer research and precision medicine by providing a server-based interface for AI agents to interact with cBioPortal data. The tool accepts queries and study identifiers as inputs and returns relevant genomic and clinical data as outputs.

Canonical page: https://skillsregistry.net/skills/pickleton89-cbioportal-mcp  
JSON: https://api.skillsregistry.net/v1/skills/pickleton89-cbioportal-mcp

## Description

A server that enables AI assistants to interact with cancer genomics data from cBioPortal, allowing users to explore cancer studies, access genomic data, and retrieve mutations and clinical information.

## Trust

- **Trust score (0–1):** 0.72
- **Verification tier:** verified
- **Last scanned:** 2026-09-28

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** other
- **Updated:** 2026-09-28

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/a6rhrqm6mn)
- **Repository:** <https://github.com/pickleton89/cbioportal-mcp>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "pickleton89-cbioportal-mcp"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/pickleton89-cbioportal-mcp` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/pickleton89-cbioportal-mcp/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt