# MGnify MCP Server

> Use this tool when you need to interact with metagenomics resources and tools, or analyze metagenomic datasets and related biological information. It provides access to MGnify's API, enabling querying and analysis of metagenomic data through the Model Context Protocol. Ideal for use cases requiring integration with MGnify resources, such as researching microbial communities or analyzing genomic data.

Canonical page: https://skillsregistry.net/skills/mgs-sails-mgnify-mcp  
JSON: https://api.skillsregistry.net/v1/skills/mgs-sails-mgnify-mcp

## Description

Enables interaction with MGnify metagenomics resources and tools through the Model Context Protocol. Provides access to MGnify's API for querying and analyzing metagenomic datasets and related biological information.

## Trust

- **Trust score (0–1):** 0.68
- **Verification tier:** scanned
- **Last scanned:** 2026-09-02

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** api-integration
- **Updated:** 2026-09-02

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/agk16ifq2x)
- **Repository:** <https://github.com/MGS-sails/mgnify-mcp>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "mgs-sails-mgnify-mcp"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/mgs-sails-mgnify-mcp` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/mgs-sails-mgnify-mcp/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt