# RELION MCP Server

> Use this tool when you need to automate cryo-EM structure determination workflows, streamline single-particle analysis, or integrate AI-driven control into your existing RELION 5.x pipeline. It provides 23 tools for natural language control, enabling seamless interaction with the software. Ideal for researchers and scientists requiring efficient and automated cryo-EM data processing and analysis.

Canonical page: https://skillsregistry.net/skills/kdursunnizam-art-relion-mcp-server  
JSON: https://api.skillsregistry.net/v1/skills/kdursunnizam-art-relion-mcp-server

## Description

Enables AI agents to control RELION 5.x cryo-EM structure determination software through natural language, providing 23 tools for the complete single-particle analysis pipeline.

## Trust

- **Trust score (0–1):** 0.68
- **Verification tier:** scanned
- **Last scanned:** 2026-09-03

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** devops-ci
- **Updated:** 2026-09-03

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/ynjphd07mu)
- **Repository:** <https://github.com/kdursunnizam-art/relion-mcp-server>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "kdursunnizam-art-relion-mcp-server"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/kdursunnizam-art-relion-mcp-server` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/kdursunnizam-art-relion-mcp-server/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt