# UniProt MCP Server

> Use this tool when you need to query protein databases or map identifiers across multiple sources. The UniProt MCP Server provides access to UniProtKB, enabling searches for protein entries, sequences, and annotations, and supports ID mapping across over 200 database types. It is ideal for bioinformatics research, protein analysis, and data integration tasks.

Canonical page: https://skillsregistry.net/skills/josefdc-uniprot-mcp  
JSON: https://api.skillsregistry.net/v1/skills/josefdc-uniprot-mcp

## Description

Provides seamless access to UniProtKB protein database, enabling queries for protein entries, sequences, Gene Ontology annotations, full-text search, and ID mapping across 200+ database types.

## Trust

- **Trust score (0–1):** 0.83
- **Verification tier:** verified
- **Last scanned:** 2026-09-19

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** database
- **Updated:** 2026-09-19

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/gmwzx66lxa)
- **Repository:** <https://github.com/josefdc/Uniprot-MCP>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "josefdc-uniprot-mcp"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/josefdc-uniprot-mcp` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/josefdc-uniprot-mcp/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt