# io.github.galaxyproject/galaxy-mcp

> Use this tool when you need to integrate and manage bioinformatics workflows, execute tools, and connect to the Galaxy platform. It solves problems related to workflow management, tool execution, and data analysis in bioinformatics. The tool accepts workflow and tool inputs and outputs managed workflows and executed tool results, ideal for use in bioinformatics research and data analysis contexts.

Canonical page: https://skillsregistry.net/skills/io-github-galaxyproject-galaxy-mcp  
JSON: https://api.skillsregistry.net/v1/skills/io-github-galaxyproject-galaxy-mcp

## Description

MCP server for Galaxy bioinformatics platform - connect, execute tools, and manage workflows

## Trust

- **Trust score (0–1):** 0.88
- **Verification tier:** verified
- **Last scanned:** 2026-09-19

## Facts

- **Version:** 1.3.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** other
- **Updated:** 2026-09-19

## Source

- **Source listing:** [MCP Registry](https://registry.modelcontextprotocol.io/v0/servers/io.github.galaxyproject%2Fgalaxy-mcp)
- **Repository:** <https://github.com/galaxyproject/galaxy-mcp>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "io-github-galaxyproject-galaxy-mcp"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/io-github-galaxyproject-galaxy-mcp` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/io-github-galaxyproject-galaxy-mcp/pull`

---
SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt