# Hypabase

> Use this tool when you need to model and analyze complex relationships between multiple entities, such as social networks, knowledge graphs, or biological systems. Hypabase solves problems in data modeling, querying, and analysis by supporting hyperedges that connect any number of nodes, and provides inputs for node and edge data with outputs for traversals, paths, and filtered results. It is ideal for use cases requiring nuanced relationship modeling, such as recommendation systems, network analysis, or data integration.

Canonical page: https://skillsregistry.net/skills/hypabase  
JSON: https://api.skillsregistry.net/v1/skills/hypabase

## Description

Hypabase is a Python hypergraph library that stores and queries relationships involving multiple entities simultaneously. Unlike traditional graphs where edges connect exactly two nodes, Hypabase supports hyperedges connecting any number of nodes in a single relationship. It provides tools for node and edge management, traversal, path finding, and provenance-based filtering with source and confidence metadata. All data is persisted locally in SQLite with namespace isolation for scoped databases.

## Trust

- **Trust score (0–1):** 0.49
- **Verification tier:** scanned
- **Last scanned:** 2026-09-02

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** database
- **Updated:** 2026-09-02

## Source

- **Source listing:** [PulseMCP](https://www.pulsemcp.com/servers/hypabase)
- **Repository:** <https://github.com/hypabase/hypabase>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "hypabase"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/hypabase` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/hypabase/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt