# noodle-mcp

> noodle-mcp — helena-bioinformatics-noodle-mcp. Use this tool when you need to search and discover biomedical literature, traverse citation networks, or explore semantic relationships between papers. It solves problems related to research, academic paper discovery, and knowledge graph navigation. The tool takes search queries or paper identifiers as input and outputs relevant papers, citations, or graph traversals.

Canonical page: https://skillsregistry.net/skills/helena-bioinformatics-noodle-mcp  
JSON: https://api.skillsregistry.net/v1/skills/helena-bioinformatics-noodle-mcp

## Description

Noodle Biomedical Literature Discovery MCP — search papers and traverse citation or semantic literature graphs.

## Trust

- **Trust score (0–1):** 0.83
- **Verification tier:** verified
- **Last scanned:** 2026-09-28

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** container
- **Runtime environment:** vm
- **License:** Apache-2.0
- **Updated:** 2026-09-28

## Source

- **Source listing:** [GitHub](https://github.com/helena-bioinformatics/noodle-mcp)

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "helena-bioinformatics-noodle-mcp"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/helena-bioinformatics-noodle-mcp` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/helena-bioinformatics-noodle-mcp/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt