# Bio-OS MCP Server

> Use this tool when you need to manage and automate bioinformatics workflows, enabling efficient workflow submission, validation, and monitoring, as well as Docker image building and tracking. It solves problems related to workflow complexity and image management, providing a streamlined interface for WDL workflow submission and Docker image status tracking. Ideal for use in bioinformatics and computational biology contexts where workflow automation and image management are crucial.

Canonical page: https://skillsregistry.net/skills/gba-bi-bioos-mcp-server  
JSON: https://api.skillsregistry.net/v1/skills/gba-bi-bioos-mcp-server

## Description

Enables workflow management and Docker image building for Bio-OS platform. Supports WDL workflow submission, validation, and monitoring, along with Docker image building and status tracking for bioinformatics workflows.

## Trust

- **Trust score (0–1):** 0.60
- **Verification tier:** unverified

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** cloud-infra
- **Updated:** 2026-04-21

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/b9fjerr9xj)
- **Repository:** <https://github.com/GBA-BI/bioos-mcp-server>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "gba-bi-bioos-mcp-server"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/gba-bi-bioos-mcp-server` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/gba-bi-bioos-mcp-server/pull`

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