# uniprot-mcp

> Use this tool when you need to access protein data from UniProt, enabling search and retrieval of entries via REST API. It solves problems related to protein data integration, mapping, and retrieval, providing outputs such as protein entries and mapped IDs. The uniprot-mcp tool takes search queries and IDs as inputs, making it ideal for use cases involving large-scale protein data analysis and natural language processing applications.

Canonical page: https://skillsregistry.net/skills/fzlzjerry-uniprot-mcp  
JSON: https://api.skillsregistry.net/v1/skills/fzlzjerry-uniprot-mcp

## Description

MCP server that exposes the UniProt REST API to LLM clients, enabling search and retrieval of protein data via tools like search_uniprotkb, get_entry, and map_ids.

## Trust

- **Trust score (0–1):** 0.69
- **Verification tier:** scanned
- **Last scanned:** 2026-08-31

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** ai-ml
- **Updated:** 2026-08-31

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/fsfnc8fons)
- **Repository:** <https://github.com/fzlzjerry/uniprot-mcp>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "fzlzjerry-uniprot-mcp"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/fzlzjerry-uniprot-mcp` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/fzlzjerry-uniprot-mcp/pull`

---
SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt