# Bio-MCP BLAST

> Use this tool when you need to perform sequence similarity searches or analyze biological sequences through natural language inputs. It solves problems related to nucleotide and protein sequence analysis, custom database creation, and data output formatting. The tool accepts natural language queries as inputs and produces outputs in multiple formats, making it ideal for bioinformatics and genomics applications.

Canonical page: https://skillsregistry.net/skills/bio-mcp-bio-mcp-blast  
JSON: https://api.skillsregistry.net/v1/skills/bio-mcp-bio-mcp-blast

## Description

Enables AI assistants to perform NCBI BLAST sequence similarity searches through natural language, supporting nucleotide and protein searches, custom database creation, and multiple output formats.

## Trust

- **Trust score (0–1):** 0.60
- **Verification tier:** unverified

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** database
- **Updated:** 2026-06-12

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/z9ggqq8t37)
- **Repository:** <https://github.com/bio-mcp/bio-mcp-blast>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "bio-mcp-bio-mcp-blast"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/bio-mcp-bio-mcp-blast` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/bio-mcp-bio-mcp-blast/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt