# Unofficial BioThings.io MCP Server

> Use this tool when you need to integrate comprehensive gene and variant annotations into your workflow, providing access to BioThings.io APIs for seamless biological data retrieval. It solves problems related to biological data analysis by offering a unified interface for querying gene and variant information. Ideal for use cases requiring standardized biological data integration, it accepts queries and returns annotated data through its API interface.

Canonical page: https://skillsregistry.net/skills/augmented-nature-biothings-mcp-server  
JSON: https://api.skillsregistry.net/v1/skills/augmented-nature-biothings-mcp-server

## Description

Provides access to BioThings.io APIs for comprehensive gene and variant annotations, enabling seamless integration of biological data into workflows.

## Trust

- **Trust score (0–1):** 0.70
- **Verification tier:** verified
- **Last scanned:** 2026-09-01

## Facts

- **Version:** 1.0.0
- **Skill type:** atomic
- **Execution layer:** mcp-remote
- **Runtime environment:** api
- **Category:** api-integration
- **Updated:** 2026-09-01

## Source

- **Source listing:** [Glama](https://glama.ai/mcp/servers/xxhlz90vs5)
- **Repository:** <https://github.com/Augmented-Nature/BioThings-MCP-Server>

## Use it

Resolve this record through the SkillsRegistry MCP server (no auth, read-only):

```
claude mcp add --transport http --scope user skillsregistry https://api.skillsregistry.net/mcp
```

```json
{
  "jsonrpc": "2.0",
  "id": 1,
  "method": "tools/call",
  "params": {
    "name": "get_skill",
    "arguments": {
      "slug": "augmented-nature-biothings-mcp-server"
    }
  }
}
```

REST: `GET https://api.skillsregistry.net/v1/skills/augmented-nature-biothings-mcp-server` · pull for local use: `GET https://api.skillsregistry.net/v1/skills/augmented-nature-biothings-mcp-server/pull`

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SkillsRegistry indexes agent skills from public registries and GitHub. Skills we have analysed are scanned with Circle-IR and scored on six dimensions; each listing states its scan coverage. More: https://skillsregistry.net/llms.txt